Articles scientifiques

2022



438 documents

  • Gonché Danesh, Corentin Boennec, Laura Verdurme, Mathilde Roussel, Sabine Trombert-Paolantoni, et al.. COVFlow: phylodynamics analyses of viruses from selected SARS-CoV-2 genome sequences. Peer Community Journal, 2023, 3, pp.e101. ⟨10.24072/pcjournal.333⟩. ⟨hal-04246696⟩
  • Isaac Dah, Rodrigue Simonet Poueme Namegni, Mohamed Moctar Mouiche Mouliom, Simon Dickmu Jumbo, Ranyl Nguena Guefack Noumedem, et al.. Prevalence and public health significance of rabies virus in bats in the North Region of Cameroon. PLoS Neglected Tropical Diseases, 2023, 17 (10), pp.e0010803. ⟨10.1371/journal.pntd.0010803⟩. ⟨hal-04301415⟩
  • Ramsès Djidjou-Demasse, Mircea T Sofonea, Marc Choisy, Samuel Alizon. Within-host evolutionary dynamics of antimicrobial quantitative resistance. Mathematical Modelling of Natural Phenomena, 2023, 18, pp.24. ⟨10.1051/mmnp/2023019⟩. ⟨hal-03194023v4⟩
  • Juliette Hayer, Jacques Dainat, Ella Marcy, Anne-Laure Bañuls. Baargin: a Nextflow workflow for the automatic analysis of bacterial genomics data with a focus on Antimicrobial Resistance. Journal of Open Source Software, 2023, 8 (90), pp.5397. ⟨10.21105/joss.05397⟩. ⟨hal-04273434⟩
  • N. Salvadori, L. Gauthier, M. Guy, Nicole Ngo-Giang-Huong, W. Khamduang, et al.. Hepatitis B prevalence and associated factors in adults presenting for infection screening in northern Thailand. Journal of Virus Eradication, 2023, 9 (4), 100356 [5 p.]. ⟨10.1016/j.jve.2023.100356⟩. ⟨hal-04385728⟩
  • Muzamil Mahdi Abdel Hamid, Mohamed Hassan Abdelraheem, Desmond Omane Acheampong, Ambroise Ahouidi, Mozam Ali, et al.. Pf7: an open dataset of Plasmodium falciparum genome variation in 20,000 worldwide samples. Wellcome Open Research, 2023, 8, pp.22. ⟨10.12688/wellcomeopenres.18681.1⟩. ⟨hal-04110334⟩
  • D. Couvet, A. Delavaud, J. Langridge, H. Soubelet, L. Abbadie, et al.. Prospective scientifique pour la recherche française sur la biodiversité - 2023. Fondation pour la Recherche sur la Biodiversité, 50 p., 2023, 979-10-91015-66-0. ⟨hal-04637987⟩
  • Claire Bonsergent, Marion Vittecoq, Carole Leray, Maggy Jouglin, Marie Buysse, et al.. A soft tick vector of Babesia sp. YLG in Yellow-legged gull (Larus michahellis) nests. Peer Community Journal, 2023, 3, pp.e91. ⟨10.24072/pcjournal.316⟩. ⟨hal-04234879⟩
  • Jérôme Bourret, Fanni Borvető, Ignacio G Bravo. Subfunctionalisation of paralogous genes and evolution of differential codon usage preferences: The showcase of polypyrimidine tract binding proteins. Journal of Evolutionary Biology, 2023, ⟨10.1111/jeb.14212⟩. ⟨hal-04196559⟩
  • Andres Garchitorena, Lova Tsikiniaina Rasoloharimanana, Rado Jl Rakotonanahary, Michelle V Evans, Ann C Miller, et al.. Morbidity and mortality burden of COVID-19 in rural Madagascar: results from a longitudinal cohort and nested seroprevalence study. International Journal of Epidemiology, In press, ⟨10.1093/ije/dyad135⟩. ⟨hal-04330452⟩

2021



2047 documents

  • Xavier Grau-Bové, Eric Lucas, Dimitra Pipini, Emily Rippon, Arjèn Van’t Hof, et al.. Resistance to pirimiphos-methyl in West African Anopheles is spreading via duplication and introgression of the Ace1 locus. PLoS Genetics, 2021, 17 (1), pp.e1009253. ⟨10.1371/journal.pgen.1009253⟩. ⟨hal-02915392⟩
  • Ceren Simsek, Victor Max M Corman, Hermann Ulrich Everling, Alexander N Lukashev, Andrea Rasche, et al.. At Least Seven Distinct Rotavirus Genotype Constellations in Bats with Evidence of Reassortment and Zoonotic Transmissions. mBio, 2021, 12 (1), ⟨10.1128/mbio.02755-20⟩. ⟨hal-03139125⟩
  • Paul Sondo, Biebo Bihoun, Marc Christian Tahita, Karim Derra, Toussaint Rouamba, et al.. Plasmodium falciparum gametocyte carriage in symptomatic patients shows significant association with genetically diverse infections, anaemia, and asexual stage density. Malaria Journal, 2021, 20 (1), ⟨10.1186/s12936-020-03559-0⟩. ⟨hal-03450564⟩
  • Marie Buysse, Maxime Duhayon, Franck Cantet, Matteo Bonazzi, Olivier Duron. Vector competence of the African argasid tick Ornithodoros moubata for the Q fever agent Coxiella burnetii. PLoS Neglected Tropical Diseases, 2021, 15 (1), pp.e0009008. ⟨10.1371/journal.pntd.0009008⟩. ⟨hal-03134571⟩
  • Antonio Vázquez, Emeline Sabourin, Pilar Alda, Clémentine Leroy, Carole Leray, et al.. Genetic diversity and relationships of the liver fluke Fasciola hepatica (Trematoda) with native and introduced definitive and intermediate hosts. Transboundary and emerging diseases, 2021, 68 (4), pp.2274-2286. ⟨10.1111/tbed.13882⟩. ⟨hal-03655458⟩
  • A. Debernardi, W. Jarassier, C. Soret, C. Mougin, Samuel Alizon, et al.. Repurposing the Hybrid Capture 2 (HC2) screening test for whole-genome sequencing of human papillomaviruses. Archives of Virology, 2021, 166 (12), pp.3421-3425. ⟨10.1007/s00705-021-05259-9⟩. ⟨hal-03425708⟩
  • Vikas Kumar, Shilpi Garg, Lalita Gupta, Kuldeep Gupta, Cheikh Tidiane Diagne, et al.. Delineating the Role of Aedes aegypti ABC Transporter Gene Family during Mosquito Development and Arboviral Infection via Transcriptome Analyses. Pathogens, 2021, 10 (9), pp.1127. ⟨10.3390/pathogens10091127⟩. ⟨hal-03877901⟩
  • Illich Mombo, Larson Boundenga, Eloise Suquet, Barthélémy Ngoubangoye, Gaël Maganga, et al.. Natural infection of free-ranging mandrills (Mandrillus sphinx) by enteroviruses and astroviruses in southern Gabon. Microbial Pathogenesis, 2021, 150, pp.104659. ⟨10.1016/j.micpath.2020.104659⟩. ⟨hal-03065952⟩
  • D. Soma, B. Zogo, P. Taconet, A. Somé, S. Coulibaly., et al.. Quantifying and characterizing hourly human exposure to malaria vectors bites to address residual malaria transmission during dry and rainy seasons in rural Southwest Burkina Faso. BMC Public Health, 2021, 21 (1), ⟨10.1186/s12889-021-10304-y⟩. ⟨hal-03126810⟩
  • Louisiane Burkart, Anthony Olivier, Olivier Lourdais, Marion Vittecoq, Gabriel Blouin‐demers, et al.. Determinants of Legacy Persistent Organic Pollutant Levels in the European Pond Turtle (Emys orbicularis) in the Camargue Wetland, France. Environmental Toxicology and Chemistry, 2021, 40 (8), pp.2261 - 2268. ⟨10.1002/etc.5077⟩. ⟨hal-03822164⟩